BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G07LP1|AL428608
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1130 617 e-176
>3x_Contig1130
Length = 4826
Score = 617 bits (311), Expect = e-176
Identities = 344/350 (98%), Gaps = 5/350 (1%)
Strand = Plus / Plus
Query: 1 atccagagaatggacagggcaagtccatgacggtttgtcgttgcggaattttccatgttg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4475 atccagagaatggacagggcaagtccatgacggtttgtcgtt-cggaattttccatgttg 4533
Query: 61 atattgtggtgatggacaacacatataaaatgcagatacaacaatctgacaagactaagt 120
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 4534 atattgtggtgatggacaacacatt--aaatg-agatacaacaatctgacaagactaagt 4590
Query: 121 cactaaagtggtaacgctgcatcaagaaaaaggccagcagccggtatcttccgtccccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4591 cactaaagtggtaacgctgcatcaagaaaaaggccagcagccggtatcttccgtccccca 4650
Query: 181 atatattttctttcgtcatgtgtctcgtacaagtgacgagcaaagttgacttaaatcggt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4651 atatattttctttcgtcatgtgtctcgtacaagtgacgag-aaagttgacttaaatcggt 4709
Query: 241 tatgtgcaagccgtgcgtactgcatcgatgcgtgccgaaaagaatatgtacatttgtata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4710 tatgtgcaagccgtgcgtactgcatcgatgcgtgccgaaaagaatatgtacatttgtata 4769
Query: 301 tgtaaaagcgttgtgtatagattactcaacaatgtaatatcataataata 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4770 tgtaaaagcgttgtgtatagattactcaacaatgtaatatcataataata 4819
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5945
Number of Sequences: 1807
Number of extensions: 5945
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)